Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.61■□□□□ 0.89
CALR3Q96L12 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALR3Q96L12 AC141586.3-201ENST00000562166 1838 ntBASIC20.61■□□□□ 0.89
CALR3Q96L12 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALR3Q96L12 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.61■□□□□ 0.89
CALR3Q96L12 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CALR3Q96L12 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALR3Q96L12 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CALR3Q96L12 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CALR3Q96L12 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CALR3Q96L12 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CALR3Q96L12 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.6■□□□□ 0.89
CALR3Q96L12 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CALR3Q96L12 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.6■□□□□ 0.89
CALR3Q96L12 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.6■□□□□ 0.89
CALR3Q96L12 RARRES2P6-201ENST00000567333 442 ntBASIC20.6■□□□□ 0.89
CALR3Q96L12 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.6■□□□□ 0.89
CALR3Q96L12 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.6■□□□□ 0.89
CALR3Q96L12 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALR3Q96L12 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CALR3Q96L12 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.59■□□□□ 0.89
CALR3Q96L12 MIR5787-201ENST00000611784 55 ntBASIC20.59■□□□□ 0.89
CALR3Q96L12 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CALR3Q96L12 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.59■□□□□ 0.89
CALR3Q96L12 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALR3Q96L12 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.59■□□□□ 0.89
CALR3Q96L12 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.58■□□□□ 0.89
CALR3Q96L12 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CALR3Q96L12 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.58■□□□□ 0.89
CALR3Q96L12 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.58■□□□□ 0.89
CALR3Q96L12 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CALR3Q96L12 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CALR3Q96L12 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 RAP2CP1-201ENST00000605103 478 ntBASIC20.58■□□□□ 0.89
CALR3Q96L12 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CALR3Q96L12 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CALR3Q96L12 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALR3Q96L12 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALR3Q96L12 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALR3Q96L12 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CALR3Q96L12 ZNF815P-204ENST00000434898 1737 ntBASIC20.58■□□□□ 0.88
CALR3Q96L12 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALR3Q96L12 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALR3Q96L12 MKRN4P-201ENST00000444706 1521 ntBASIC20.58■□□□□ 0.88
CALR3Q96L12 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.57■□□□□ 0.88
CALR3Q96L12 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.57■□□□□ 0.88
CALR3Q96L12 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.57■□□□□ 0.88
CALR3Q96L12 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms