Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 AC093484.2-201ENST00000580996 2166 ntBASIC16.92■□□□□ 0.3
CPNE2Q96FN4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 AL512625.2-201ENST00000417533 625 ntBASIC16.92■□□□□ 0.3
CPNE2Q96FN4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 Z82202.1-201ENST00000623446 1880 ntBASIC16.92■□□□□ 0.3
CPNE2Q96FN4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.92■□□□□ 0.3
CPNE2Q96FN4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 AC010980.2-201ENST00000587099 1412 ntBASIC16.91■□□□□ 0.3
CPNE2Q96FN4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPNE2Q96FN4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE2Q96FN4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE2Q96FN4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CPNE2Q96FN4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CPNE2Q96FN4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE2Q96FN4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CPNE2Q96FN4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.89■□□□□ 0.3
CPNE2Q96FN4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.89■□□□□ 0.29
CPNE2Q96FN4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE2Q96FN4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms