Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 AC142086.2-201ENST00000569753 217 ntBASIC20.62■□□□□ 0.89
TRIM11Q96F44 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 AL121829.2-201ENST00000620908 328 ntBASIC20.62■□□□□ 0.89
TRIM11Q96F44 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM11Q96F44 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM11Q96F44 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM11Q96F44 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM11Q96F44 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 SOX15-203ENST00000570788 1093 ntBASIC20.61■□□□□ 0.89
TRIM11Q96F44 AC104771.1-201ENST00000603335 964 ntBASIC20.61■□□□□ 0.89
TRIM11Q96F44 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 ZNF815P-204ENST00000434898 1737 ntBASIC20.61■□□□□ 0.89
TRIM11Q96F44 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRIM11Q96F44 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM11Q96F44 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.6■□□□□ 0.89
TRIM11Q96F44 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM11Q96F44 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM11Q96F44 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM11Q96F44 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM11Q96F44 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM11Q96F44 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM11Q96F44 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TRIM11Q96F44 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM11Q96F44 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM11Q96F44 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM11Q96F44 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM11Q96F44 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM11Q96F44 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 AC008687.6-201ENST00000596318 630 ntBASIC20.59■□□□□ 0.89
TRIM11Q96F44 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM11Q96F44 KRT8P8-201ENST00000434750 1448 ntBASIC20.59■□□□□ 0.89
TRIM11Q96F44 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TRIM11Q96F44 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM11Q96F44 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM11Q96F44 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM11Q96F44 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM11Q96F44 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.58■□□□□ 0.88
TRIM11Q96F44 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
TRIM11Q96F44 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms