Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE4Q96A23 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE4Q96A23 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE4Q96A23 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE4Q96A23 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE4Q96A23 AC066615.1-201ENST00000640911 628 ntBASIC17.52■□□□□ 0.4
CPNE4Q96A23 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE4Q96A23 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE4Q96A23 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
CPNE4Q96A23 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CPNE4Q96A23 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CPNE4Q96A23 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.51■□□□□ 0.39
CPNE4Q96A23 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 C1QL1P1-201ENST00000568105 661 ntBASIC17.51■□□□□ 0.39
CPNE4Q96A23 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CPNE4Q96A23 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE4Q96A23 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE4Q96A23 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE4Q96A23 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 KRT8P8-201ENST00000434750 1448 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 RPS2P55-201ENST00000397318 883 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 RPS2P4-201ENST00000476944 856 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 AP002982.1-201ENST00000492365 877 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 AC107956.1-201ENST00000494359 873 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 AC093827.2-201ENST00000512654 315 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 AC233702.5-201ENST00000584107 538 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 AL353708.3-201ENST00000610272 989 ntBASIC17.49■□□□□ 0.39
CPNE4Q96A23 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms