Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP7Q93009 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP7Q93009 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP7Q93009 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP7Q93009 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP7Q93009 AC007952.6-201ENST00000573168 2673 ntBASIC19.26■□□□□ 0.67
USP7Q93009 AC003957.1-201ENST00000625108 2673 ntBASIC19.26■□□□□ 0.67
USP7Q93009 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
USP7Q93009 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.26■□□□□ 0.67
USP7Q93009 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 KRT18P21-201ENST00000515767 1272 ntBASIC19.26■□□□□ 0.67
USP7Q93009 PRKY-204ENST00000533551 1019 ntBASIC19.26■□□□□ 0.67
USP7Q93009 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.26■□□□□ 0.67
USP7Q93009 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.26■□□□□ 0.67
USP7Q93009 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP7Q93009 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP7Q93009 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 KRT8P17-201ENST00000453110 1448 ntBASIC19.25■□□□□ 0.67
USP7Q93009 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
USP7Q93009 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
USP7Q93009 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
USP7Q93009 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.25■□□□□ 0.67
USP7Q93009 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 TSPY15P-201ENST00000457163 923 ntBASIC19.25■□□□□ 0.67
USP7Q93009 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.25■□□□□ 0.67
USP7Q93009 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.25■□□□□ 0.67
USP7Q93009 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP7Q93009 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.24■□□□□ 0.67
USP7Q93009 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.24■□□□□ 0.67
USP7Q93009 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
USP7Q93009 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.24■□□□□ 0.67
USP7Q93009 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.24■□□□□ 0.67
USP7Q93009 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.24■□□□□ 0.67
USP7Q93009 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.24■□□□□ 0.67
USP7Q93009 RARRES2P10-201ENST00000564312 460 ntBASIC19.24■□□□□ 0.67
USP7Q93009 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP7Q93009 AL031963.3-201ENST00000606441 850 ntBASIC19.24■□□□□ 0.67
USP7Q93009 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.24■□□□□ 0.67
USP7Q93009 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 AL158211.5-201ENST00000623583 2518 ntBASIC19.24■□□□□ 0.67
USP7Q93009 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.24■□□□□ 0.67
USP7Q93009 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.24■□□□□ 0.67
USP7Q93009 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP7Q93009 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP7Q93009 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP7Q93009 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.23■□□□□ 0.67
USP7Q93009 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP7Q93009 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.23■□□□□ 0.67
USP7Q93009 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.23■□□□□ 0.67
USP7Q93009 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.23■□□□□ 0.67
USP7Q93009 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.23■□□□□ 0.67
USP7Q93009 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.23■□□□□ 0.67
USP7Q93009 AC133561.5-201ENST00000635547 218 ntBASIC19.23■□□□□ 0.67
USP7Q93009 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP7Q93009 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms