Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RTF1Q92541 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTF1Q92541 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC25.47■■□□□ 1.67
RTF1Q92541 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.47■■□□□ 1.67
RTF1Q92541 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.47■■□□□ 1.67
RTF1Q92541 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RTF1Q92541 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.47■■□□□ 1.67
RTF1Q92541 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RTF1Q92541 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.47■■□□□ 1.67
RTF1Q92541 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.47■■□□□ 1.67
RTF1Q92541 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.47■■□□□ 1.67
RTF1Q92541 DGCR10-201ENST00000609839 495 ntBASIC25.47■■□□□ 1.67
RTF1Q92541 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.46■■□□□ 1.67
RTF1Q92541 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
RTF1Q92541 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
RTF1Q92541 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.46■■□□□ 1.67
RTF1Q92541 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.46■■□□□ 1.67
RTF1Q92541 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.46■■□□□ 1.67
RTF1Q92541 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.46■■□□□ 1.67
RTF1Q92541 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.46■■□□□ 1.67
RTF1Q92541 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 AC130371.2-201ENST00000619443 611 ntBASIC25.46■■□□□ 1.67
RTF1Q92541 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
RTF1Q92541 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 RCC2P6-201ENST00000526625 1557 ntBASIC25.46■■□□□ 1.67
RTF1Q92541 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
RTF1Q92541 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.46■■□□□ 1.67
RTF1Q92541 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.46■■□□□ 1.67
RTF1Q92541 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTF1Q92541 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
RTF1Q92541 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
RTF1Q92541 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.67
RTF1Q92541 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
RTF1Q92541 TCF3P1-201ENST00000423021 1937 ntBASIC25.45■■□□□ 1.67
RTF1Q92541 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.67
RTF1Q92541 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.45■■□□□ 1.66
RTF1Q92541 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.45■■□□□ 1.66
RTF1Q92541 NAPSB-206ENST00000562112 1266 ntBASIC25.45■■□□□ 1.66
RTF1Q92541 AC011298.2-201ENST00000617989 482 ntBASIC25.45■■□□□ 1.66
RTF1Q92541 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.45■■□□□ 1.66
RTF1Q92541 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RTF1Q92541 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.45■■□□□ 1.66
RTF1Q92541 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.44■■□□□ 1.66
RTF1Q92541 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.44■■□□□ 1.66
RTF1Q92541 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.44■■□□□ 1.66
RTF1Q92541 AC004951.3-201ENST00000418645 1148 ntBASIC25.44■■□□□ 1.66
RTF1Q92541 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.44■■□□□ 1.66
RTF1Q92541 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.44■■□□□ 1.66
RTF1Q92541 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.44■■□□□ 1.66
RTF1Q92541 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.44■■□□□ 1.66
RTF1Q92541 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.44■■□□□ 1.66
RTF1Q92541 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.44■■□□□ 1.66
RTF1Q92541 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTF1Q92541 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.43■■□□□ 1.66
RTF1Q92541 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RTF1Q92541 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTF1Q92541 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RTF1Q92541 CYP2D8P-201ENST00000433633 1490 ntBASIC25.43■■□□□ 1.66
RTF1Q92541 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.43■■□□□ 1.66
RTF1Q92541 FAM210CP-201ENST00000445714 574 ntBASIC25.43■■□□□ 1.66
RTF1Q92541 AC097488.1-201ENST00000507834 756 ntBASIC25.43■■□□□ 1.66
RTF1Q92541 AL160286.2-201ENST00000567150 934 ntBASIC25.43■■□□□ 1.66
RTF1Q92541 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
RTF1Q92541 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.43■■□□□ 1.66
RTF1Q92541 AC145285.6-201ENST00000604632 637 ntBASIC25.43■■□□□ 1.66
RTF1Q92541 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.43■■□□□ 1.66
RTF1Q92541 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTF1Q92541 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTF1Q92541 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RTF1Q92541 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTF1Q92541 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms