Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX1Q92499 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
DDX1Q92499 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 AP006587.1-201ENST00000534129 1502 ntBASIC20.79■□□□□ 0.92
DDX1Q92499 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DDX1Q92499 POM121L13P-201ENST00000422362 380 ntBASIC20.79■□□□□ 0.92
DDX1Q92499 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX1Q92499 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX1Q92499 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
DDX1Q92499 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX1Q92499 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX1Q92499 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
DDX1Q92499 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX1Q92499 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX1Q92499 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.78■□□□□ 0.92
DDX1Q92499 YBX1P10-201ENST00000444752 975 ntBASIC20.78■□□□□ 0.92
DDX1Q92499 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.78■□□□□ 0.92
DDX1Q92499 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX1Q92499 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DDX1Q92499 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX1Q92499 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX1Q92499 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.77■□□□□ 0.92
DDX1Q92499 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX1Q92499 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX1Q92499 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX1Q92499 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
DDX1Q92499 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX1Q92499 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX1Q92499 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.77■□□□□ 0.92
DDX1Q92499 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX1Q92499 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX1Q92499 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX1Q92499 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
DDX1Q92499 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DDX1Q92499 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
DDX1Q92499 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX1Q92499 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.76■□□□□ 0.91
DDX1Q92499 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX1Q92499 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX1Q92499 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX1Q92499 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.76■□□□□ 0.91
DDX1Q92499 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.76■□□□□ 0.91
DDX1Q92499 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX1Q92499 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
DDX1Q92499 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DDX1Q92499 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX1Q92499 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX1Q92499 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX1Q92499 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX1Q92499 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms