Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.02■■□□□ 1.28
STAG1Q8WVM7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 KSR1P1-201ENST00000446298 240 ntBASIC23.02■■□□□ 1.28
STAG1Q8WVM7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 AL445675.2-201ENST00000620291 557 ntBASIC23.02■■□□□ 1.28
STAG1Q8WVM7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 KRT17P2-201ENST00000300992 1314 ntBASIC23.02■■□□□ 1.28
STAG1Q8WVM7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
STAG1Q8WVM7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
STAG1Q8WVM7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23■■□□□ 1.27
STAG1Q8WVM7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23■■□□□ 1.27
STAG1Q8WVM7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
STAG1Q8WVM7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23■■□□□ 1.27
STAG1Q8WVM7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23■■□□□ 1.27
STAG1Q8WVM7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
STAG1Q8WVM7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
STAG1Q8WVM7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 MIR4785-201ENST00000585005 73 ntBASIC22.98■■□□□ 1.27
STAG1Q8WVM7 CD177P1-201ENST00000606252 935 ntBASIC22.98■■□□□ 1.27
STAG1Q8WVM7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.98■■□□□ 1.27
STAG1Q8WVM7 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms