Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 RBM17P1-201ENST00000453646 1190 ntBASIC27.18■■□□□ 1.94
TMC1Q8TDI8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 KRT18P16-201ENST00000510337 1294 ntBASIC27.18■■□□□ 1.94
TMC1Q8TDI8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
TMC1Q8TDI8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 TCF3P1-201ENST00000423021 1937 ntBASIC27.17■■□□□ 1.94
TMC1Q8TDI8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 AC079598.2-202ENST00000546624 1451 ntBASIC27.17■■□□□ 1.94
TMC1Q8TDI8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TMC1Q8TDI8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 AFG3L1P-217ENST00000557444 2447 ntBASIC27.16■■□□□ 1.94
TMC1Q8TDI8 MMP23A-201ENST00000234610 1017 ntBASIC27.16■■□□□ 1.94
TMC1Q8TDI8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 AP000525.1-201ENST00000608286 694 ntBASIC27.16■■□□□ 1.94
TMC1Q8TDI8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC27.16■■□□□ 1.94
TMC1Q8TDI8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMC1Q8TDI8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC27.14■■□□□ 1.94
TMC1Q8TDI8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
TMC1Q8TDI8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC27.14■■□□□ 1.94
TMC1Q8TDI8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC27.14■■□□□ 1.94
TMC1Q8TDI8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC27.14■■□□□ 1.94
TMC1Q8TDI8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC27.14■■□□□ 1.94
TMC1Q8TDI8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
TMC1Q8TDI8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 KRT18P21-201ENST00000515767 1272 ntBASIC27.13■■□□□ 1.93
TMC1Q8TDI8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 KRT8P9-201ENST00000558927 1449 ntBASIC27.13■■□□□ 1.93
TMC1Q8TDI8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMC1Q8TDI8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 UNC93B2-201ENST00000285383 730 ntBASIC27.12■■□□□ 1.93
TMC1Q8TDI8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TMC1Q8TDI8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms