Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHKBP1Q8TBC3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHKBP1Q8TBC3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 TERF1P1-201ENST00000311003 1181 ntBASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 KRT18P35-201ENST00000510488 1269 ntBASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 AC131212.4-201ENST00000623606 975 ntBASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHKBP1Q8TBC3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 SLC25A3P1-201ENST00000443844 931 ntBASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 AP005242.2-201ENST00000580065 1175 ntBASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 DGCR10-201ENST00000609839 495 ntBASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHKBP1Q8TBC3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
SHKBP1Q8TBC3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 AL049597.2-201ENST00000565575 961 ntBASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms