Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LMO3Q8TAP4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LMO3Q8TAP4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LMO3Q8TAP4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LMO3Q8TAP4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LMO3Q8TAP4 SDHAP1-207ENST00000440850 2000 ntBASIC20.94■□□□□ 0.94
LMO3Q8TAP4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
LMO3Q8TAP4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 PRKY-204ENST00000533551 1019 ntBASIC20.93■□□□□ 0.94
LMO3Q8TAP4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 AC073648.6-201ENST00000641589 218 ntBASIC20.93■□□□□ 0.94
LMO3Q8TAP4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.93■□□□□ 0.94
LMO3Q8TAP4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 RN7SL471P-201ENST00000580476 299 ntBASIC20.92■□□□□ 0.94
LMO3Q8TAP4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 AL023875.1-201ENST00000640777 796 ntBASIC20.92■□□□□ 0.94
LMO3Q8TAP4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.92■□□□□ 0.94
LMO3Q8TAP4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMO3Q8TAP4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 TEX21P-204ENST00000641479 1693 ntBASIC20.9■□□□□ 0.94
LMO3Q8TAP4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 POU5F1P3-201ENST00000428824 1078 ntBASIC20.9■□□□□ 0.94
LMO3Q8TAP4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 AC006058.3-201ENST00000606217 1069 ntBASIC20.9■□□□□ 0.94
LMO3Q8TAP4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 AC098818.2-201ENST00000564925 2320 ntBASIC20.9■□□□□ 0.94
LMO3Q8TAP4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 AC018445.3-201ENST00000624177 1945 ntBASIC20.9■□□□□ 0.94
LMO3Q8TAP4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMO3Q8TAP4 BX323043.1-201ENST00000641006 1765 ntBASIC20.9■□□□□ 0.94
LMO3Q8TAP4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.89■□□□□ 0.94
LMO3Q8TAP4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LMO3Q8TAP4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LMO3Q8TAP4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms