Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTL9Q8NET4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RTL9Q8NET4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.05■■□□□ 1.44
RTL9Q8NET4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.05■■□□□ 1.44
RTL9Q8NET4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTL9Q8NET4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.05■■□□□ 1.44
RTL9Q8NET4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTL9Q8NET4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTL9Q8NET4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.05■■□□□ 1.44
RTL9Q8NET4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RTL9Q8NET4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTL9Q8NET4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTL9Q8NET4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.05■■□□□ 1.44
RTL9Q8NET4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTL9Q8NET4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RTL9Q8NET4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL9Q8NET4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 AL023803.3-201ENST00000615559 522 ntBASIC24.03■■□□□ 1.44
RTL9Q8NET4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL9Q8NET4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
RTL9Q8NET4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.02■■□□□ 1.44
RTL9Q8NET4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.02■■□□□ 1.44
RTL9Q8NET4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTL9Q8NET4 AC092338.2-201ENST00000568827 1415 ntBASIC24.02■■□□□ 1.44
RTL9Q8NET4 PKD1P6-201ENST00000343738 4769 ntBASIC24.02■■□□□ 1.44
RTL9Q8NET4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.02■■□□□ 1.44
RTL9Q8NET4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTL9Q8NET4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTL9Q8NET4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTL9Q8NET4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTL9Q8NET4 HMGA1P5-201ENST00000412453 271 ntBASIC24.02■■□□□ 1.44
RTL9Q8NET4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.02■■□□□ 1.44
RTL9Q8NET4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.02■■□□□ 1.44
RTL9Q8NET4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.02■■□□□ 1.44
RTL9Q8NET4 AC010653.2-201ENST00000623505 997 ntBASIC24.02■■□□□ 1.44
RTL9Q8NET4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTL9Q8NET4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.01■■□□□ 1.43
RTL9Q8NET4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms