Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01555Q8NAE3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 AC073195.1-201ENST00000607241 877 ntBASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01555Q8NAE3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 LINC01465-201ENST00000408887 1940 ntBASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 KSR1P1-201ENST00000446298 240 ntBASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 AL445675.2-201ENST00000620291 557 ntBASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01555Q8NAE3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 FAM197Y1-201ENST00000421178 764 ntBASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 AL596275.1-201ENST00000423464 877 ntBASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 CD177P1-201ENST00000606252 935 ntBASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LINC01555Q8NAE3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 SNORA78-201ENST00000459373 127 ntBASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
LINC01555Q8NAE3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms