Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN19Q8N6F1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 AC133681.1-201ENST00000465482 601 ntBASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 AC098590.1-201ENST00000468126 897 ntBASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN19Q8N6F1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 AC116562.4-201ENST00000641316 2276 ntBASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN19Q8N6F1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 AC093484.2-201ENST00000580996 2166 ntBASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 AC004264.1-201ENST00000608354 794 ntBASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 AC110285.5-201ENST00000611501 352 ntBASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 AL359736.2-201ENST00000621992 437 ntBASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN19Q8N6F1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CLDN19Q8N6F1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN19Q8N6F1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN19Q8N6F1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN19Q8N6F1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.27■□□□□ 0.67
CLDN19Q8N6F1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN19Q8N6F1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 KRT8P8-201ENST00000434750 1448 ntBASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN19Q8N6F1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms