Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 POM121L13P-201ENST00000422362 380 ntBASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9CQ8N5M4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 YBX1P10-201ENST00000444752 975 ntBASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC9CQ8N5M4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
TTC9CQ8N5M4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 RNA5SP413-201ENST00000516373 109 ntBASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC9CQ8N5M4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms