Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39CQ8N584 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TTC39CQ8N584 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC39CQ8N584 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC39CQ8N584 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TTC39CQ8N584 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC39CQ8N584 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC39CQ8N584 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 AP002982.1-201ENST00000492365 877 ntBASIC20.75■□□□□ 0.91
TTC39CQ8N584 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 AP001412.1-201ENST00000608405 714 ntBASIC20.75■□□□□ 0.91
TTC39CQ8N584 AP006294.2-201ENST00000641667 209 ntBASIC20.75■□□□□ 0.91
TTC39CQ8N584 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC39CQ8N584 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.75■□□□□ 0.91
TTC39CQ8N584 PCDHAC2-203ENST00000615316 3011 ntBASIC20.75■□□□□ 0.91
TTC39CQ8N584 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TTC39CQ8N584 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.74■□□□□ 0.91
TTC39CQ8N584 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC39CQ8N584 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 NIFKP9-201ENST00000419265 221 ntBASIC20.73■□□□□ 0.91
TTC39CQ8N584 KSR1P1-201ENST00000446298 240 ntBASIC20.73■□□□□ 0.91
TTC39CQ8N584 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 AL445675.2-201ENST00000620291 557 ntBASIC20.73■□□□□ 0.91
TTC39CQ8N584 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TTC39CQ8N584 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TTC39CQ8N584 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39CQ8N584 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39CQ8N584 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39CQ8N584 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms