Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 KRT16P1-201ENST00000399124 1418 ntBASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHTF2Q8N3S3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 AP006587.1-201ENST00000534129 1502 ntBASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 AL512408.1-201ENST00000569378 2000 ntBASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHTF2Q8N3S3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 AL162377.1-201ENST00000618844 1793 ntBASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 UNC93B2-201ENST00000285383 730 ntBASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 AC018553.1-201ENST00000616682 1458 ntBASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.16■□□□□ 0.82
PHTF2Q8N3S3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 AC145285.6-201ENST00000604632 637 ntBASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 KRT16P6-202ENST00000425692 1426 ntBASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHTF2Q8N3S3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PHTF2Q8N3S3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 MESTP1-201ENST00000404287 994 ntBASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 YBX1P10-201ENST00000444752 975 ntBASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 KRT18P16-201ENST00000510337 1294 ntBASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.14■□□□□ 0.81
PHTF2Q8N3S3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms