Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SMC5Q8IY18 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.17■■□□□ 1.46
SMC5Q8IY18 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.17■■□□□ 1.46
SMC5Q8IY18 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SMC5Q8IY18 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SMC5Q8IY18 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 AC004408.2-201ENST00000623613 2777 ntBASIC24.17■■□□□ 1.46
SMC5Q8IY18 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 SDHAP1-207ENST00000440850 2000 ntBASIC24.17■■□□□ 1.46
SMC5Q8IY18 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SMC5Q8IY18 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
SMC5Q8IY18 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 AL161938.1-201ENST00000569833 2180 ntBASIC24.16■■□□□ 1.46
SMC5Q8IY18 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
SMC5Q8IY18 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SMC5Q8IY18 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.16■■□□□ 1.46
SMC5Q8IY18 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SMC5Q8IY18 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC24.16■■□□□ 1.46
SMC5Q8IY18 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMC5Q8IY18 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 AC093503.3-201ENST00000624917 2352 ntBASIC24.15■■□□□ 1.46
SMC5Q8IY18 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 UNC93B4-201ENST00000505679 747 ntBASIC24.15■■□□□ 1.46
SMC5Q8IY18 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC24.15■■□□□ 1.46
SMC5Q8IY18 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMC5Q8IY18 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.14■■□□□ 1.46
SMC5Q8IY18 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SMC5Q8IY18 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
SMC5Q8IY18 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SMC5Q8IY18 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SMC5Q8IY18 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMC5Q8IY18 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMC5Q8IY18 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SMC5Q8IY18 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMC5Q8IY18 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SMC5Q8IY18 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.14■■□□□ 1.45
SMC5Q8IY18 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.14■■□□□ 1.45
SMC5Q8IY18 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.14■■□□□ 1.45
SMC5Q8IY18 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.14■■□□□ 1.45
SMC5Q8IY18 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SMC5Q8IY18 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMC5Q8IY18 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMC5Q8IY18 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMC5Q8IY18 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMC5Q8IY18 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SMC5Q8IY18 AL049812.1-201ENST00000432563 2267 ntBASIC24.13■■□□□ 1.45
SMC5Q8IY18 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMC5Q8IY18 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMC5Q8IY18 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
SMC5Q8IY18 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms