Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
APLFQ8IW19 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
APLFQ8IW19 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.27■□□□□ 0.68
APLFQ8IW19 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.27■□□□□ 0.68
APLFQ8IW19 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.27■□□□□ 0.68
APLFQ8IW19 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.27■□□□□ 0.68
APLFQ8IW19 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.27■□□□□ 0.68
APLFQ8IW19 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
APLFQ8IW19 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.27■□□□□ 0.68
APLFQ8IW19 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
APLFQ8IW19 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APLFQ8IW19 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
APLFQ8IW19 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APLFQ8IW19 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
APLFQ8IW19 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APLFQ8IW19 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
APLFQ8IW19 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.27■□□□□ 0.67
APLFQ8IW19 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.27■□□□□ 0.67
APLFQ8IW19 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APLFQ8IW19 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
APLFQ8IW19 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
APLFQ8IW19 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
APLFQ8IW19 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APLFQ8IW19 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APLFQ8IW19 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.26■□□□□ 0.67
APLFQ8IW19 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.26■□□□□ 0.67
APLFQ8IW19 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APLFQ8IW19 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
APLFQ8IW19 AC008550.1-201ENST00000511500 884 ntBASIC19.26■□□□□ 0.67
APLFQ8IW19 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.26■□□□□ 0.67
APLFQ8IW19 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APLFQ8IW19 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APLFQ8IW19 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.26■□□□□ 0.67
APLFQ8IW19 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.26■□□□□ 0.67
APLFQ8IW19 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APLFQ8IW19 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.25■□□□□ 0.67
APLFQ8IW19 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
APLFQ8IW19 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.25■□□□□ 0.67
APLFQ8IW19 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
APLFQ8IW19 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.25■□□□□ 0.67
APLFQ8IW19 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
APLFQ8IW19 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.25■□□□□ 0.67
APLFQ8IW19 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.25■□□□□ 0.67
APLFQ8IW19 AL359736.2-201ENST00000621992 437 ntBASIC19.25■□□□□ 0.67
APLFQ8IW19 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
APLFQ8IW19 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
APLFQ8IW19 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APLFQ8IW19 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
APLFQ8IW19 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.24■□□□□ 0.67
APLFQ8IW19 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.24■□□□□ 0.67
APLFQ8IW19 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
APLFQ8IW19 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
APLFQ8IW19 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 AC007225.1-201ENST00000566331 1836 ntBASIC19.24■□□□□ 0.67
APLFQ8IW19 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.24■□□□□ 0.67
APLFQ8IW19 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
APLFQ8IW19 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
APLFQ8IW19 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.24■□□□□ 0.67
APLFQ8IW19 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.24■□□□□ 0.67
APLFQ8IW19 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.24■□□□□ 0.67
APLFQ8IW19 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
APLFQ8IW19 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.24■□□□□ 0.67
APLFQ8IW19 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APLFQ8IW19 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APLFQ8IW19 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.23■□□□□ 0.67
APLFQ8IW19 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms