Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 AC007613.1-201ENST00000572811 2597 ntBASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRTM1Q86UE6 AC009113.1-201ENST00000570267 2443 ntBASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRTM1Q86UE6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 AC104581.1-202ENST00000635932 2618 ntBASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 CYP2T3P-201ENST00000601990 817 ntBASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 AC018553.1-201ENST00000616682 1458 ntBASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRTM1Q86UE6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.89■□□□□ 0.3
LRRTM1Q86UE6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 AC068338.2-201ENST00000563278 1430 ntBASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms