Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 AC133561.4-201ENST00000566112 224 ntBASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 AC009237.14-201ENST00000609975 1594 ntBASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00173Q6ZV60 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 AC061975.6-201ENST00000579045 1553 ntBASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 AP004607.4-201ENST00000530158 1459 ntBASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 FP475955.4-201ENST00000623131 1990 ntBASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00173Q6ZV60 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 AC008894.3-201ENST00000624324 3103 ntBASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00173Q6ZV60 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms