Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.82■■□□□ 1.4
CASC1Q6TDU7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASC1Q6TDU7 TFP1-202ENST00000475455 1573 ntBASIC23.82■■□□□ 1.4
CASC1Q6TDU7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASC1Q6TDU7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 AP000974.1-201ENST00000623909 2387 ntBASIC23.81■■□□□ 1.4
CASC1Q6TDU7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASC1Q6TDU7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 HLA-L-209ENST00000420110 1011 ntBASIC23.8■■□□□ 1.4
CASC1Q6TDU7 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 AC098818.2-201ENST00000564925 2320 ntBASIC23.8■■□□□ 1.4
CASC1Q6TDU7 MIR4758-201ENST00000577688 71 ntBASIC23.8■■□□□ 1.4
CASC1Q6TDU7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASC1Q6TDU7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.79■■□□□ 1.4
CASC1Q6TDU7 AC091874.3-201ENST00000512672 1195 ntBASIC23.79■■□□□ 1.4
CASC1Q6TDU7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.79■■□□□ 1.4
CASC1Q6TDU7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 ID1-201ENST00000376105 1233 ntBASIC23.78■■□□□ 1.4
CASC1Q6TDU7 AL138781.1-201ENST00000566567 1274 ntBASIC23.78■■□□□ 1.4
CASC1Q6TDU7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASC1Q6TDU7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CASC1Q6TDU7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms