Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 C1QL1P1-201ENST00000568105 661 ntBASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP4R3AQ6IN85 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PPP4R3AQ6IN85 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.14■■□□□ 1.14
PPP4R3AQ6IN85 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.14■■□□□ 1.14
PPP4R3AQ6IN85 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
PPP4R3AQ6IN85 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
PPP4R3AQ6IN85 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.14■■□□□ 1.14
PPP4R3AQ6IN85 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4R3AQ6IN85 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 RARRES2P10-201ENST00000564312 460 ntBASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4R3AQ6IN85 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4R3AQ6IN85 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms