Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC38Q5VT99 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC38Q5VT99 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 AC104417.2-201ENST00000562989 1793 ntBASIC20.24■□□□□ 0.83
LRRC38Q5VT99 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 TEX21P-204ENST00000641479 1693 ntBASIC20.24■□□□□ 0.83
LRRC38Q5VT99 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC38Q5VT99 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC38Q5VT99 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 UNC93B4-201ENST00000505679 747 ntBASIC20.22■□□□□ 0.83
LRRC38Q5VT99 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LRRC38Q5VT99 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms