Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 MIR1224-201ENST00000408193 85 ntBASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 AC097488.1-201ENST00000507834 756 ntBASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 DGCR10-201ENST00000609839 495 ntBASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.58■□□□□ 0.24
ARFGEF3Q5TH69 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 MMP23A-201ENST00000234610 1017 ntBASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARFGEF3Q5TH69 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 RCC2P6-201ENST00000526625 1557 ntBASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 MIR1238-201ENST00000408483 83 ntBASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 Z85996.1-201ENST00000494644 937 ntBASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 KRT18P21-201ENST00000515767 1272 ntBASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 AC112907.3-201ENST00000577781 2400 ntBASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 AC099778.1-201ENST00000568593 1911 ntBASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARFGEF3Q5TH69 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 HLA-A-209ENST00000638375 975 ntBASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 AC092865.7-201ENST00000641832 219 ntBASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 AL445228.2-201ENST00000605589 952 ntBASIC16.55■□□□□ 0.24
ARFGEF3Q5TH69 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms