Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 AL049812.1-201ENST00000432563 2267 ntBASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00242Q5T6M2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
LINC00242Q5T6M2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 AC104581.1-202ENST00000635932 2618 ntBASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 LETM1P2-201ENST00000597330 2178 ntBASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 KRT18P61-201ENST00000585825 1298 ntBASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 AC013268.1-206ENST00000638368 961 ntBASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 AC112229.1-201ENST00000639295 961 ntBASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 AC141586.3-201ENST00000562166 1838 ntBASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00242Q5T6M2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 KRT18P68-201ENST00000392293 1000 ntBASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 AC009113.1-201ENST00000570267 2443 ntBASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00242Q5T6M2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00242Q5T6M2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms