Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
LRIF1Q5T3J3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRIF1Q5T3J3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIF1Q5T3J3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIF1Q5T3J3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIF1Q5T3J3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIF1Q5T3J3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIF1Q5T3J3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 AL049812.1-201ENST00000432563 2267 ntBASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 AC006333.2-201ENST00000607957 2099 ntBASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIF1Q5T3J3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 RARRES2P6-201ENST00000567333 442 ntBASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIF1Q5T3J3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 AC004911.1-201ENST00000416316 871 ntBASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.36■□□□□ 0.53
LRIF1Q5T3J3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 AL162430.1-201ENST00000480705 870 ntBASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 AC005829.2-201ENST00000571422 1056 ntBASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
LRIF1Q5T3J3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms