Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.67■□□□□ 0.9
VARS2Q5ST30 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VARS2Q5ST30 AC099778.1-201ENST00000568593 1911 ntBASIC20.67■□□□□ 0.9
VARS2Q5ST30 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARS2Q5ST30 SLC25A3P1-201ENST00000443844 931 ntBASIC20.67■□□□□ 0.9
VARS2Q5ST30 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.67■□□□□ 0.9
VARS2Q5ST30 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.67■□□□□ 0.9
VARS2Q5ST30 AC091390.4-202ENST00000476426 537 ntBASIC20.67■□□□□ 0.9
VARS2Q5ST30 AL160286.2-201ENST00000567150 934 ntBASIC20.67■□□□□ 0.9
VARS2Q5ST30 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
VARS2Q5ST30 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARS2Q5ST30 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARS2Q5ST30 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARS2Q5ST30 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.67■□□□□ 0.9
VARS2Q5ST30 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARS2Q5ST30 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARS2Q5ST30 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
VARS2Q5ST30 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VARS2Q5ST30 LINC01465-201ENST00000408887 1940 ntBASIC20.66■□□□□ 0.9
VARS2Q5ST30 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 TSPY14P-201ENST00000303979 915 ntBASIC20.66■□□□□ 0.9
VARS2Q5ST30 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 KRT18P57-201ENST00000443599 1254 ntBASIC20.66■□□□□ 0.9
VARS2Q5ST30 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 EGLN1P1-201ENST00000531623 762 ntBASIC20.66■□□□□ 0.9
VARS2Q5ST30 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VARS2Q5ST30 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
VARS2Q5ST30 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 TERF1P1-201ENST00000311003 1181 ntBASIC20.65■□□□□ 0.9
VARS2Q5ST30 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 AL137013.1-201ENST00000432946 1228 ntBASIC20.65■□□□□ 0.9
VARS2Q5ST30 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VARS2Q5ST30 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VARS2Q5ST30 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
VARS2Q5ST30 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VARS2Q5ST30 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VARS2Q5ST30 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.64■□□□□ 0.9
VARS2Q5ST30 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.64■□□□□ 0.9
VARS2Q5ST30 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VARS2Q5ST30 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 AC096733.2-201ENST00000609937 1394 ntBASIC20.64■□□□□ 0.89
VARS2Q5ST30 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 MFAP1P1-201ENST00000442257 1255 ntBASIC20.64■□□□□ 0.89
VARS2Q5ST30 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VARS2Q5ST30 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.64■□□□□ 0.89
VARS2Q5ST30 AC073508.3-201ENST00000619697 1419 ntBASIC20.63■□□□□ 0.89
VARS2Q5ST30 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
VARS2Q5ST30 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VARS2Q5ST30 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms