Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP13A4Q4VNC1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP13A4Q4VNC1 AC008687.6-201ENST00000596318 630 ntBASIC20.33■□□□□ 0.85
ATP13A4Q4VNC1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ATP13A4Q4VNC1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP13A4Q4VNC1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATP13A4Q4VNC1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 ID1-201ENST00000376105 1233 ntBASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 UNC93B4-201ENST00000505679 747 ntBASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 RNF165-205ENST00000588679 2904 ntBASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 BX323043.1-201ENST00000641006 1765 ntBASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A4Q4VNC1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 AP006587.1-201ENST00000534129 1502 ntBASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A4Q4VNC1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.29■□□□□ 0.84
ATP13A4Q4VNC1 AC008403.3-201ENST00000598924 454 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms