Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 FAM201B-201ENST00000458407 597 ntBASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN20Q4JDL3 AC005332.7-201ENST00000614046 2005 ntBASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 ITM2C-210ENST00000620962 501 ntBASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN20Q4JDL3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 AC133681.1-201ENST00000465482 601 ntBASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTPN20Q4JDL3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 C1QBPP2-201ENST00000528754 825 ntBASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 ZNF815P-204ENST00000434898 1737 ntBASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN20Q4JDL3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
PTPN20Q4JDL3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.52■□□□□ 0.87
PTPN20Q4JDL3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 PRORSD1P-201ENST00000295112 541 ntBASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN20Q4JDL3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms