Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
ASIC1P78348 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.75■■□□□ 1.07
ASIC1P78348 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.75■■□□□ 1.07
ASIC1P78348 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.75■■□□□ 1.07
ASIC1P78348 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.75■■□□□ 1.07
ASIC1P78348 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.75■■□□□ 1.07
ASIC1P78348 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.75■■□□□ 1.07
ASIC1P78348 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.75■■□□□ 1.07
ASIC1P78348 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
ASIC1P78348 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ASIC1P78348 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.75■■□□□ 1.07
ASIC1P78348 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ASIC1P78348 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.74■■□□□ 1.07
ASIC1P78348 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ASIC1P78348 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.74■■□□□ 1.07
ASIC1P78348 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.74■■□□□ 1.07
ASIC1P78348 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 POM121L13P-201ENST00000422362 380 ntBASIC21.74■■□□□ 1.07
ASIC1P78348 YBX1P10-201ENST00000444752 975 ntBASIC21.74■■□□□ 1.07
ASIC1P78348 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.74■■□□□ 1.07
ASIC1P78348 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.74■■□□□ 1.07
ASIC1P78348 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.74■■□□□ 1.07
ASIC1P78348 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.74■■□□□ 1.07
ASIC1P78348 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.74■■□□□ 1.07
ASIC1P78348 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.74■■□□□ 1.07
ASIC1P78348 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ASIC1P78348 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
ASIC1P78348 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.74■■□□□ 1.07
ASIC1P78348 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.74■■□□□ 1.07
ASIC1P78348 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ASIC1P78348 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.74■■□□□ 1.07
ASIC1P78348 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ASIC1P78348 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.73■■□□□ 1.07
ASIC1P78348 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
ASIC1P78348 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.73■■□□□ 1.07
ASIC1P78348 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
ASIC1P78348 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.73■■□□□ 1.07
ASIC1P78348 AP003097.1-201ENST00000530657 1135 ntBASIC21.73■■□□□ 1.07
ASIC1P78348 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 AC008403.3-201ENST00000598924 454 ntBASIC21.73■■□□□ 1.07
ASIC1P78348 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.73■■□□□ 1.07
ASIC1P78348 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ASIC1P78348 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
ASIC1P78348 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ASIC1P78348 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.72■■□□□ 1.07
ASIC1P78348 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ASIC1P78348 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.72■■□□□ 1.07
ASIC1P78348 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.72■■□□□ 1.07
ASIC1P78348 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
ASIC1P78348 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
ASIC1P78348 KRT18P6-201ENST00000555540 1265 ntBASIC21.72■■□□□ 1.07
ASIC1P78348 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.72■■□□□ 1.07
ASIC1P78348 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.72■■□□□ 1.07
ASIC1P78348 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.72■■□□□ 1.07
ASIC1P78348 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 AL032819.2-201ENST00000624543 2162 ntBASIC21.72■■□□□ 1.07
ASIC1P78348 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ASIC1P78348 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms