Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.18■□□□□ 0.66
ABCE1P61221 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCE1P61221 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.18■□□□□ 0.66
ABCE1P61221 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.18■□□□□ 0.66
ABCE1P61221 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.18■□□□□ 0.66
ABCE1P61221 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.18■□□□□ 0.66
ABCE1P61221 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 CYP2T3P-201ENST00000601990 817 ntBASIC19.18■□□□□ 0.66
ABCE1P61221 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ABCE1P61221 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ABCE1P61221 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
ABCE1P61221 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
ABCE1P61221 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ABCE1P61221 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCE1P61221 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 AC068338.2-201ENST00000563278 1430 ntBASIC19.17■□□□□ 0.66
ABCE1P61221 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCE1P61221 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.17■□□□□ 0.66
ABCE1P61221 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 KRT18P11-201ENST00000435214 1283 ntBASIC19.17■□□□□ 0.66
ABCE1P61221 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ABCE1P61221 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCE1P61221 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCE1P61221 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 AL049812.1-201ENST00000432563 2267 ntBASIC19.17■□□□□ 0.66
ABCE1P61221 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCE1P61221 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCE1P61221 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
ABCE1P61221 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
ABCE1P61221 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.16■□□□□ 0.66
ABCE1P61221 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ABCE1P61221 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ABCE1P61221 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 AC006333.2-201ENST00000607957 2099 ntBASIC19.16■□□□□ 0.66
ABCE1P61221 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ABCE1P61221 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCE1P61221 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.16■□□□□ 0.66
ABCE1P61221 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.16■□□□□ 0.66
ABCE1P61221 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
ABCE1P61221 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCE1P61221 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCE1P61221 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCE1P61221 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ABCE1P61221 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCE1P61221 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCE1P61221 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 AC141586.3-201ENST00000562166 1838 ntBASIC19.15■□□□□ 0.66
ABCE1P61221 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCE1P61221 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCE1P61221 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCE1P61221 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCE1P61221 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCE1P61221 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms