Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.16■□□□□ 0.34
UBE2NP61088 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2NP61088 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2NP61088 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.16■□□□□ 0.34
UBE2NP61088 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.16■□□□□ 0.34
UBE2NP61088 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2NP61088 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.16■□□□□ 0.34
UBE2NP61088 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2NP61088 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2NP61088 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBE2NP61088 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.16■□□□□ 0.34
UBE2NP61088 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UBE2NP61088 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBE2NP61088 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBE2NP61088 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2NP61088 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UBE2NP61088 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2NP61088 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
UBE2NP61088 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2NP61088 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
UBE2NP61088 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 AL135905.2-201ENST00000584934 1404 ntBASIC17.15■□□□□ 0.34
UBE2NP61088 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 TMEM179-206ENST00000616017 1645 ntBASIC17.15■□□□□ 0.34
UBE2NP61088 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.15■□□□□ 0.34
UBE2NP61088 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.15■□□□□ 0.34
UBE2NP61088 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.15■□□□□ 0.34
UBE2NP61088 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.15■□□□□ 0.34
UBE2NP61088 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.15■□□□□ 0.34
UBE2NP61088 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
UBE2NP61088 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2NP61088 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBE2NP61088 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
UBE2NP61088 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
UBE2NP61088 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2NP61088 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBE2NP61088 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2NP61088 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
UBE2NP61088 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2NP61088 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 AL353807.1-201ENST00000427475 662 ntBASIC17.14■□□□□ 0.33
UBE2NP61088 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBE2NP61088 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2NP61088 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.14■□□□□ 0.33
UBE2NP61088 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.14■□□□□ 0.33
UBE2NP61088 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UBE2NP61088 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2NP61088 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2NP61088 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
UBE2NP61088 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2NP61088 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.13■□□□□ 0.33
UBE2NP61088 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UBE2NP61088 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.13■□□□□ 0.33
UBE2NP61088 AC008550.1-201ENST00000511500 884 ntBASIC17.13■□□□□ 0.33
UBE2NP61088 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
UBE2NP61088 RARRES2P10-201ENST00000564312 460 ntBASIC17.13■□□□□ 0.33
UBE2NP61088 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.13■□□□□ 0.33
UBE2NP61088 AP001412.1-201ENST00000608405 714 ntBASIC17.13■□□□□ 0.33
UBE2NP61088 AC066615.1-201ENST00000640911 628 ntBASIC17.13■□□□□ 0.33
UBE2NP61088 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2NP61088 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2NP61088 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBE2NP61088 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBE2NP61088 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms