Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SPCS3P61009 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPCS3P61009 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPCS3P61009 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPCS3P61009 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPCS3P61009 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SPCS3P61009 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SPCS3P61009 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SPCS3P61009 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 RARRES2P4-201ENST00000514074 484 ntBASIC15.83■□□□□ 0.12
SPCS3P61009 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.83■□□□□ 0.12
SPCS3P61009 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.83■□□□□ 0.12
SPCS3P61009 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.83■□□□□ 0.12
SPCS3P61009 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.83■□□□□ 0.12
SPCS3P61009 AC105020.6-201ENST00000621523 1217 ntBASIC15.83■□□□□ 0.12
SPCS3P61009 LINC01465-201ENST00000408887 1940 ntBASIC15.83■□□□□ 0.12
SPCS3P61009 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SPCS3P61009 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
SPCS3P61009 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SPCS3P61009 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SPCS3P61009 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SPCS3P61009 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SPCS3P61009 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 PHGDH-210ENST00000641115 1638 ntBASIC15.83■□□□□ 0.12
SPCS3P61009 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPCS3P61009 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.83■□□□□ 0.12
SPCS3P61009 NEFHP1-201ENST00000412845 2629 ntBASIC15.82■□□□□ 0.12
SPCS3P61009 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SPCS3P61009 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 KRT18P68-201ENST00000392293 1000 ntBASIC15.82■□□□□ 0.12
SPCS3P61009 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SPCS3P61009 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SPCS3P61009 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SPCS3P61009 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SPCS3P61009 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.82■□□□□ 0.12
SPCS3P61009 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.82■□□□□ 0.12
SPCS3P61009 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPCS3P61009 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SPCS3P61009 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.81■□□□□ 0.12
SPCS3P61009 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.81■□□□□ 0.12
SPCS3P61009 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.81■□□□□ 0.12
SPCS3P61009 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.81■□□□□ 0.12
SPCS3P61009 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SPCS3P61009 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.81■□□□□ 0.12
SPCS3P61009 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SPCS3P61009 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SPCS3P61009 NTF6G-201ENST00000591094 616 ntBASIC15.81■□□□□ 0.12
SPCS3P61009 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SPCS3P61009 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS3P61009 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms