Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.52■□□□□ 0.4
CASP6P55212 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.52■□□□□ 0.4
CASP6P55212 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.52■□□□□ 0.4
CASP6P55212 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASP6P55212 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.52■□□□□ 0.4
CASP6P55212 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.52■□□□□ 0.4
CASP6P55212 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CASP6P55212 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.52■□□□□ 0.39
CASP6P55212 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASP6P55212 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.52■□□□□ 0.39
CASP6P55212 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CASP6P55212 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CASP6P55212 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 MESTP1-201ENST00000404287 994 ntBASIC17.51■□□□□ 0.39
CASP6P55212 HMGA1P5-201ENST00000412453 271 ntBASIC17.51■□□□□ 0.39
CASP6P55212 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.51■□□□□ 0.39
CASP6P55212 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.51■□□□□ 0.39
CASP6P55212 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.51■□□□□ 0.39
CASP6P55212 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.51■□□□□ 0.39
CASP6P55212 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.51■□□□□ 0.39
CASP6P55212 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CASP6P55212 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.5■□□□□ 0.39
CASP6P55212 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
CASP6P55212 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CASP6P55212 AC004951.3-201ENST00000418645 1148 ntBASIC17.5■□□□□ 0.39
CASP6P55212 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.5■□□□□ 0.39
CASP6P55212 AC011506.1-201ENST00000474329 610 ntBASIC17.5■□□□□ 0.39
CASP6P55212 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 AP000692.2-201ENST00000608391 879 ntBASIC17.5■□□□□ 0.39
CASP6P55212 AC011298.2-201ENST00000617989 482 ntBASIC17.5■□□□□ 0.39
CASP6P55212 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASP6P55212 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CASP6P55212 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.5■□□□□ 0.39
CASP6P55212 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASP6P55212 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CASP6P55212 EP400NL-214ENST00000641289 2402 ntBASIC17.5■□□□□ 0.39
CASP6P55212 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CASP6P55212 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 PHGDH-210ENST00000641115 1638 ntBASIC17.5■□□□□ 0.39
CASP6P55212 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CASP6P55212 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CASP6P55212 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 AC005229.4-201ENST00000610085 2198 ntBASIC17.49■□□□□ 0.39
CASP6P55212 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.49■□□□□ 0.39
CASP6P55212 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.49■□□□□ 0.39
CASP6P55212 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.49■□□□□ 0.39
CASP6P55212 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.49■□□□□ 0.39
CASP6P55212 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CASP6P55212 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.49■□□□□ 0.39
CASP6P55212 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CASP6P55212 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.49■□□□□ 0.39
CASP6P55212 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CASP6P55212 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CASP6P55212 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.48■□□□□ 0.39
CASP6P55212 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CASP6P55212 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASP6P55212 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.48■□□□□ 0.39
CASP6P55212 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CASP6P55212 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.48■□□□□ 0.39
CASP6P55212 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CASP6P55212 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.48■□□□□ 0.39
CASP6P55212 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms