Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.95■□□□□ 0.62
PDX1P52945 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.95■□□□□ 0.62
PDX1P52945 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.95■□□□□ 0.62
PDX1P52945 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDX1P52945 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.95■□□□□ 0.62
PDX1P52945 AL445675.2-201ENST00000620291 557 ntBASIC18.95■□□□□ 0.62
PDX1P52945 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDX1P52945 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.95■□□□□ 0.62
PDX1P52945 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDX1P52945 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.95■□□□□ 0.62
PDX1P52945 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 AL512408.1-201ENST00000569378 2000 ntBASIC18.95■□□□□ 0.62
PDX1P52945 AP006587.1-201ENST00000534129 1502 ntBASIC18.95■□□□□ 0.62
PDX1P52945 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.94■□□□□ 0.62
PDX1P52945 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.94■□□□□ 0.62
PDX1P52945 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.94■□□□□ 0.62
PDX1P52945 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.94■□□□□ 0.62
PDX1P52945 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.94■□□□□ 0.62
PDX1P52945 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.94■□□□□ 0.62
PDX1P52945 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
PDX1P52945 AC026271.3-201ENST00000571884 352 ntBASIC18.94■□□□□ 0.62
PDX1P52945 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PDX1P52945 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.94■□□□□ 0.62
PDX1P52945 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDX1P52945 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.94■□□□□ 0.62
PDX1P52945 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.94■□□□□ 0.62
PDX1P52945 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDX1P52945 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PDX1P52945 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PDX1P52945 AC092720.2-201ENST00000602388 1665 ntBASIC18.93■□□□□ 0.62
PDX1P52945 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.93■□□□□ 0.62
PDX1P52945 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.93■□□□□ 0.62
PDX1P52945 AL137013.1-201ENST00000432946 1228 ntBASIC18.93■□□□□ 0.62
PDX1P52945 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.93■□□□□ 0.62
PDX1P52945 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.93■□□□□ 0.62
PDX1P52945 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.93■□□□□ 0.62
PDX1P52945 AL031985.4-201ENST00000642138 673 ntBASIC18.93■□□□□ 0.62
PDX1P52945 AL391422.3-201ENST00000603791 2761 ntBASIC18.93■□□□□ 0.62
PDX1P52945 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 AC116351.2-201ENST00000606540 1585 ntBASIC18.93■□□□□ 0.62
PDX1P52945 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PDX1P52945 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.93■□□□□ 0.62
PDX1P52945 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
PDX1P52945 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDX1P52945 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.92■□□□□ 0.62
PDX1P52945 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.92■□□□□ 0.62
PDX1P52945 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PDX1P52945 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDX1P52945 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDX1P52945 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PDX1P52945 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.92■□□□□ 0.62
PDX1P52945 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDX1P52945 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.92■□□□□ 0.62
PDX1P52945 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.92■□□□□ 0.62
PDX1P52945 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.92■□□□□ 0.62
PDX1P52945 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
PDX1P52945 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PDX1P52945 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.92■□□□□ 0.62
PDX1P52945 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDX1P52945 DPP3P2-201ENST00000416030 1696 ntBASIC18.92■□□□□ 0.62
PDX1P52945 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.91■□□□□ 0.62
PDX1P52945 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms