Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGA2P52926 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGA2P52926 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMGA2P52926 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGA2P52926 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGA2P52926 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 AC005082.1-201ENST00000413042 2259 ntBASIC17.81■□□□□ 0.44
HMGA2P52926 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGA2P52926 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGA2P52926 GPX1P1-201ENST00000388829 606 ntBASIC17.81■□□□□ 0.44
HMGA2P52926 AC016769.1-201ENST00000409132 1010 ntBASIC17.81■□□□□ 0.44
HMGA2P52926 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HMGA2P52926 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGA2P52926 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGA2P52926 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HMGA2P52926 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGA2P52926 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGA2P52926 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGA2P52926 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
HMGA2P52926 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGA2P52926 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.8■□□□□ 0.44
HMGA2P52926 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.8■□□□□ 0.44
HMGA2P52926 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 AC009113.1-201ENST00000570267 2443 ntBASIC17.8■□□□□ 0.44
HMGA2P52926 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGA2P52926 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGA2P52926 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.8■□□□□ 0.44
HMGA2P52926 Z98044.1-201ENST00000632503 1764 ntBASIC17.8■□□□□ 0.44
HMGA2P52926 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGA2P52926 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGA2P52926 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HMGA2P52926 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGA2P52926 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGA2P52926 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HMGA2P52926 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HMGA2P52926 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGA2P52926 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 AC007322.1-201ENST00000426983 750 ntBASIC17.79■□□□□ 0.44
HMGA2P52926 KRT18P5-201ENST00000436075 1291 ntBASIC17.79■□□□□ 0.44
HMGA2P52926 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGA2P52926 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGA2P52926 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HMGA2P52926 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGA2P52926 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGA2P52926 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HMGA2P52926 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
HMGA2P52926 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HMGA2P52926 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGA2P52926 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HMGA2P52926 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 AC073210.2-201ENST00000430369 194 ntBASIC17.78■□□□□ 0.44
HMGA2P52926 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.78■□□□□ 0.44
HMGA2P52926 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
HMGA2P52926 AC087623.3-201ENST00000607047 1098 ntBASIC17.78■□□□□ 0.44
HMGA2P52926 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms