Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC009102.2-201ENST00000606772 1639 ntBASIC19.13■□□□□ 0.65
GTF2A1P52655 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
GTF2A1P52655 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.13■□□□□ 0.65
GTF2A1P52655 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GTF2A1P52655 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GTF2A1P52655 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
GTF2A1P52655 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 YBX1P4-201ENST00000392794 808 ntBASIC19.12■□□□□ 0.65
GTF2A1P52655 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GTF2A1P52655 AC103702.1-201ENST00000548801 2630 ntBASIC19.12■□□□□ 0.65
GTF2A1P52655 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
GTF2A1P52655 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.12■□□□□ 0.65
GTF2A1P52655 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GTF2A1P52655 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GTF2A1P52655 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.11■□□□□ 0.65
GTF2A1P52655 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
GTF2A1P52655 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GTF2A1P52655 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GTF2A1P52655 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
GTF2A1P52655 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.11■□□□□ 0.65
GTF2A1P52655 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 CROCCP1-201ENST00000426910 5675 ntBASIC19.11■□□□□ 0.65
GTF2A1P52655 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF2A1P52655 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
GTF2A1P52655 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.11■□□□□ 0.65
GTF2A1P52655 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GTF2A1P52655 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
GTF2A1P52655 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF2A1P52655 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.11■□□□□ 0.65
GTF2A1P52655 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GTF2A1P52655 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.11■□□□□ 0.65
GTF2A1P52655 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF2A1P52655 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF2A1P52655 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
GTF2A1P52655 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.1■□□□□ 0.65
GTF2A1P52655 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.1■□□□□ 0.65
GTF2A1P52655 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
GTF2A1P52655 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF2A1P52655 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.1■□□□□ 0.65
GTF2A1P52655 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GTF2A1P52655 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
GTF2A1P52655 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
GTF2A1P52655 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2A1P52655 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GTF2A1P52655 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
GTF2A1P52655 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
GTF2A1P52655 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2A1P52655 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
GTF2A1P52655 TREX1-205ENST00000625293 1783 ntBASIC19.09■□□□□ 0.65
GTF2A1P52655 AC021242.3-201ENST00000607598 1377 ntBASIC19.09■□□□□ 0.65
GTF2A1P52655 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2A1P52655 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GTF2A1P52655 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF2A1P52655 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GTF2A1P52655 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms