Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.87■□□□□ 0.61
RAB28P51157 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 NIFKP9-201ENST00000419265 221 ntBASIC18.87■□□□□ 0.61
RAB28P51157 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB28P51157 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.87■□□□□ 0.61
RAB28P51157 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB28P51157 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB28P51157 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 Z99916.2-201ENST00000604037 246 ntBASIC18.87■□□□□ 0.61
RAB28P51157 AC125437.2-201ENST00000625180 2167 ntBASIC18.87■□□□□ 0.61
RAB28P51157 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB28P51157 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB28P51157 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB28P51157 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB28P51157 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB28P51157 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB28P51157 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAB28P51157 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 RPS2P4-201ENST00000476944 856 ntBASIC18.86■□□□□ 0.61
RAB28P51157 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB28P51157 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB28P51157 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB28P51157 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
RAB28P51157 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB28P51157 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB28P51157 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB28P51157 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RAB28P51157 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB28P51157 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB28P51157 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
RAB28P51157 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB28P51157 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB28P51157 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB28P51157 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB28P51157 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB28P51157 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB28P51157 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB28P51157 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB28P51157 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.85■□□□□ 0.61
RAB28P51157 AC073195.1-201ENST00000607241 877 ntBASIC18.85■□□□□ 0.61
RAB28P51157 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB28P51157 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB28P51157 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB28P51157 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB28P51157 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 TREX1-205ENST00000625293 1783 ntBASIC18.84■□□□□ 0.61
RAB28P51157 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RAB28P51157 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 KSR1P1-201ENST00000446298 240 ntBASIC18.84■□□□□ 0.61
RAB28P51157 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB28P51157 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB28P51157 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.84■□□□□ 0.61
RAB28P51157 AL049637.2-201ENST00000641778 930 ntBASIC18.84■□□□□ 0.61
RAB28P51157 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB28P51157 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB28P51157 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RAB28P51157 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB28P51157 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB28P51157 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RAB28P51157 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB28P51157 AFG3L1P-217ENST00000557444 2447 ntBASIC18.83■□□□□ 0.61
RAB28P51157 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB28P51157 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB28P51157 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB28P51157 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB28P51157 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB28P51157 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms