Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CENPAP49450 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.66■□□□□ 0.42
CENPAP49450 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CENPAP49450 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.66■□□□□ 0.42
CENPAP49450 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.65■□□□□ 0.42
CENPAP49450 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CENPAP49450 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.65■□□□□ 0.42
CENPAP49450 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 TREX1-205ENST00000625293 1783 ntBASIC17.65■□□□□ 0.42
CENPAP49450 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CENPAP49450 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CENPAP49450 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.64■□□□□ 0.42
CENPAP49450 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.64■□□□□ 0.41
CENPAP49450 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.64■□□□□ 0.41
CENPAP49450 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.64■□□□□ 0.41
CENPAP49450 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CENPAP49450 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CENPAP49450 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.64■□□□□ 0.41
CENPAP49450 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CENPAP49450 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.64■□□□□ 0.41
CENPAP49450 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.64■□□□□ 0.41
CENPAP49450 AC105036.2-201ENST00000569468 176 ntBASIC17.64■□□□□ 0.41
CENPAP49450 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.64■□□□□ 0.41
CENPAP49450 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CENPAP49450 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.63■□□□□ 0.41
CENPAP49450 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 AL512625.2-201ENST00000417533 625 ntBASIC17.63■□□□□ 0.41
CENPAP49450 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.63■□□□□ 0.41
CENPAP49450 AC073111.5-205ENST00000641717 521 ntBASIC17.63■□□□□ 0.41
CENPAP49450 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.63■□□□□ 0.41
CENPAP49450 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CENPAP49450 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.63■□□□□ 0.41
CENPAP49450 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CENPAP49450 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CENPAP49450 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPAP49450 MKRN4P-201ENST00000444706 1521 ntBASIC17.62■□□□□ 0.41
CENPAP49450 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPAP49450 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CENPAP49450 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPAP49450 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.62■□□□□ 0.41
CENPAP49450 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.62■□□□□ 0.41
CENPAP49450 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.62■□□□□ 0.41
CENPAP49450 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPAP49450 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPAP49450 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms