Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CSNK1DP48730 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1DP48730 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.62■□□□□ 0.73
CSNK1DP48730 AC004980.1-204ENST00000429707 299 ntBASIC19.62■□□□□ 0.73
CSNK1DP48730 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1DP48730 AC026271.3-201ENST00000571884 352 ntBASIC19.62■□□□□ 0.73
CSNK1DP48730 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CSNK1DP48730 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.62■□□□□ 0.73
CSNK1DP48730 AL031985.4-201ENST00000642138 673 ntBASIC19.62■□□□□ 0.73
CSNK1DP48730 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1DP48730 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1DP48730 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CSNK1DP48730 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1DP48730 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1DP48730 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1DP48730 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1DP48730 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.61■□□□□ 0.73
CSNK1DP48730 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1DP48730 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1DP48730 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1DP48730 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CSNK1DP48730 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1DP48730 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1DP48730 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CSNK1DP48730 AL596275.1-201ENST00000423464 877 ntBASIC19.61■□□□□ 0.73
CSNK1DP48730 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CSNK1DP48730 SNORA78-201ENST00000459373 127 ntBASIC19.61■□□□□ 0.73
CSNK1DP48730 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1DP48730 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CSNK1DP48730 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.61■□□□□ 0.73
CSNK1DP48730 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CSNK1DP48730 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CSNK1DP48730 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1DP48730 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1DP48730 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.61■□□□□ 0.73
CSNK1DP48730 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 KRT17P2-201ENST00000300992 1314 ntBASIC19.6■□□□□ 0.73
CSNK1DP48730 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CSNK1DP48730 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CSNK1DP48730 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.6■□□□□ 0.73
CSNK1DP48730 NUDT16P1-203ENST00000513809 620 ntBASIC19.6■□□□□ 0.73
CSNK1DP48730 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.6■□□□□ 0.73
CSNK1DP48730 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.6■□□□□ 0.73
CSNK1DP48730 AL160286.2-201ENST00000567150 934 ntBASIC19.6■□□□□ 0.73
CSNK1DP48730 MIR4785-201ENST00000585005 73 ntBASIC19.6■□□□□ 0.73
CSNK1DP48730 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CSNK1DP48730 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1DP48730 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1DP48730 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.6■□□□□ 0.73
CSNK1DP48730 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CSNK1DP48730 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CSNK1DP48730 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CSNK1DP48730 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CSNK1DP48730 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CSNK1DP48730 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CSNK1DP48730 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 AC116562.2-201ENST00000507042 360 ntBASIC19.59■□□□□ 0.73
CSNK1DP48730 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1DP48730 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1DP48730 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 AC026471.5-201ENST00000615068 467 ntBASIC19.59■□□□□ 0.73
CSNK1DP48730 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.59■□□□□ 0.73
CSNK1DP48730 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1DP48730 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1DP48730 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms