Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 Z85996.1-201ENST00000494644 937 ntBASIC20.79■□□□□ 0.92
BRCC3P46736 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
BRCC3P46736 SLC25A1P4-201ENST00000567977 778 ntBASIC20.79■□□□□ 0.92
BRCC3P46736 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.79■□□□□ 0.92
BRCC3P46736 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 AC010331.1-201ENST00000611423 582 ntBASIC20.79■□□□□ 0.92
BRCC3P46736 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.79■□□□□ 0.92
BRCC3P46736 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.79■□□□□ 0.92
BRCC3P46736 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
BRCC3P46736 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCC3P46736 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BRCC3P46736 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BRCC3P46736 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.78■□□□□ 0.92
BRCC3P46736 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.78■□□□□ 0.92
BRCC3P46736 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 AP000692.2-201ENST00000608391 879 ntBASIC20.78■□□□□ 0.92
BRCC3P46736 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.78■□□□□ 0.92
BRCC3P46736 AC005363.2-201ENST00000618631 242 ntBASIC20.78■□□□□ 0.92
BRCC3P46736 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCC3P46736 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCC3P46736 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCC3P46736 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
BRCC3P46736 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
BRCC3P46736 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
BRCC3P46736 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCC3P46736 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCC3P46736 TCF3P1-201ENST00000423021 1937 ntBASIC20.77■□□□□ 0.92
BRCC3P46736 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCC3P46736 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCC3P46736 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.77■□□□□ 0.92
BRCC3P46736 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.77■□□□□ 0.92
BRCC3P46736 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.77■□□□□ 0.92
BRCC3P46736 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.77■□□□□ 0.92
BRCC3P46736 AC091390.4-202ENST00000476426 537 ntBASIC20.77■□□□□ 0.92
BRCC3P46736 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.77■□□□□ 0.92
BRCC3P46736 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.77■□□□□ 0.92
BRCC3P46736 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.77■□□□□ 0.92
BRCC3P46736 AP005242.2-201ENST00000580065 1175 ntBASIC20.77■□□□□ 0.92
BRCC3P46736 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.77■□□□□ 0.92
BRCC3P46736 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
BRCC3P46736 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BRCC3P46736 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
BRCC3P46736 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.77■□□□□ 0.92
BRCC3P46736 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCC3P46736 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.77■□□□□ 0.92
BRCC3P46736 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
BRCC3P46736 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BRCC3P46736 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.76■□□□□ 0.91
BRCC3P46736 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BRCC3P46736 AC005521.1-201ENST00000393351 872 ntBASIC20.76■□□□□ 0.91
BRCC3P46736 TMPOP1-202ENST00000424642 1267 ntBASIC20.76■□□□□ 0.91
BRCC3P46736 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.76■□□□□ 0.91
BRCC3P46736 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.76■□□□□ 0.91
BRCC3P46736 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.76■□□□□ 0.91
BRCC3P46736 AL160286.2-201ENST00000567150 934 ntBASIC20.76■□□□□ 0.91
BRCC3P46736 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.76■□□□□ 0.91
BRCC3P46736 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCC3P46736 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRCC3P46736 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BRCC3P46736 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.75■□□□□ 0.91
BRCC3P46736 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.75■□□□□ 0.91
BRCC3P46736 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.75■□□□□ 0.91
BRCC3P46736 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRCC3P46736 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
BRCC3P46736 FAM207BP-201ENST00000447172 505 ntBASIC20.75■□□□□ 0.91
BRCC3P46736 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.75■□□□□ 0.91
BRCC3P46736 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms