Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MMP13P45452 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP13P45452 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.27■□□□□ 0.84
MMP13P45452 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.27■□□□□ 0.84
MMP13P45452 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MMP13P45452 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.27■□□□□ 0.84
MMP13P45452 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
MMP13P45452 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MMP13P45452 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.27■□□□□ 0.83
MMP13P45452 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MMP13P45452 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.27■□□□□ 0.83
MMP13P45452 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
MMP13P45452 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MMP13P45452 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.27■□□□□ 0.83
MMP13P45452 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.26■□□□□ 0.83
MMP13P45452 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP13P45452 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.26■□□□□ 0.83
MMP13P45452 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.26■□□□□ 0.83
MMP13P45452 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.26■□□□□ 0.83
MMP13P45452 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 SOX15-203ENST00000570788 1093 ntBASIC20.26■□□□□ 0.83
MMP13P45452 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MMP13P45452 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MMP13P45452 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
MMP13P45452 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.26■□□□□ 0.83
MMP13P45452 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MMP13P45452 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.25■□□□□ 0.83
MMP13P45452 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP13P45452 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MMP13P45452 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
MMP13P45452 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
MMP13P45452 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP13P45452 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MMP13P45452 UNC93B5-201ENST00000530315 699 ntBASIC20.25■□□□□ 0.83
MMP13P45452 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.25■□□□□ 0.83
MMP13P45452 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.25■□□□□ 0.83
MMP13P45452 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.25■□□□□ 0.83
MMP13P45452 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.25■□□□□ 0.83
MMP13P45452 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.25■□□□□ 0.83
MMP13P45452 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
MMP13P45452 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.24■□□□□ 0.83
MMP13P45452 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.24■□□□□ 0.83
MMP13P45452 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.24■□□□□ 0.83
MMP13P45452 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.24■□□□□ 0.83
MMP13P45452 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.24■□□□□ 0.83
MMP13P45452 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MMP13P45452 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MMP13P45452 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.24■□□□□ 0.83
MMP13P45452 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP13P45452 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
MMP13P45452 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.23■□□□□ 0.83
MMP13P45452 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP13P45452 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP13P45452 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP13P45452 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP13P45452 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP13P45452 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
MMP13P45452 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MMP13P45452 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms