Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.44■□□□□ 0.86
MTHFRP42898 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.44■□□□□ 0.86
MTHFRP42898 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.44■□□□□ 0.86
MTHFRP42898 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 DPP3P2-201ENST00000416030 1696 ntBASIC20.44■□□□□ 0.86
MTHFRP42898 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.44■□□□□ 0.86
MTHFRP42898 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MTHFRP42898 AC092338.2-201ENST00000568827 1415 ntBASIC20.44■□□□□ 0.86
MTHFRP42898 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MTHFRP42898 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MTHFRP42898 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MTHFRP42898 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
MTHFRP42898 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
MTHFRP42898 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.43■□□□□ 0.86
MTHFRP42898 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.43■□□□□ 0.86
MTHFRP42898 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.43■□□□□ 0.86
MTHFRP42898 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.43■□□□□ 0.86
MTHFRP42898 AL121894.2-201ENST00000602977 491 ntBASIC20.43■□□□□ 0.86
MTHFRP42898 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.43■□□□□ 0.86
MTHFRP42898 AC011558.1-201ENST00000623459 338 ntBASIC20.43■□□□□ 0.86
MTHFRP42898 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.43■□□□□ 0.86
MTHFRP42898 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.43■□□□□ 0.86
MTHFRP42898 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.43■□□□□ 0.86
MTHFRP42898 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MTHFRP42898 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MTHFRP42898 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.42■□□□□ 0.86
MTHFRP42898 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.42■□□□□ 0.86
MTHFRP42898 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.42■□□□□ 0.86
MTHFRP42898 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.42■□□□□ 0.86
MTHFRP42898 FAM86EP-206ENST00000510506 987 ntBASIC20.42■□□□□ 0.86
MTHFRP42898 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.42■□□□□ 0.86
MTHFRP42898 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.42■□□□□ 0.86
MTHFRP42898 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
MTHFRP42898 IER3-202ENST00000376377 1350 ntBASIC20.42■□□□□ 0.86
MTHFRP42898 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
MTHFRP42898 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MTHFRP42898 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.42■□□□□ 0.86
MTHFRP42898 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MTHFRP42898 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.42■□□□□ 0.86
MTHFRP42898 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MTHFRP42898 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MTHFRP42898 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.42■□□□□ 0.86
MTHFRP42898 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
MTHFRP42898 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MTHFRP42898 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MTHFRP42898 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MTHFRP42898 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
MTHFRP42898 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.41■□□□□ 0.86
MTHFRP42898 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MTHFRP42898 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.41■□□□□ 0.86
MTHFRP42898 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.41■□□□□ 0.86
MTHFRP42898 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.41■□□□□ 0.86
MTHFRP42898 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.41■□□□□ 0.86
MTHFRP42898 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MTHFRP42898 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MTHFRP42898 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MTHFRP42898 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MTHFRP42898 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MTHFRP42898 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MTHFRP42898 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.4■□□□□ 0.86
MTHFRP42898 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MTHFRP42898 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MTHFRP42898 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MTHFRP42898 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MTHFRP42898 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.4■□□□□ 0.86
MTHFRP42898 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MTHFRP42898 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.4■□□□□ 0.86
MTHFRP42898 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
MTHFRP42898 AL023803.3-201ENST00000615559 522 ntBASIC20.4■□□□□ 0.86
MTHFRP42898 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.4■□□□□ 0.86
MTHFRP42898 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.4■□□□□ 0.86
MTHFRP42898 PHGDH-210ENST00000641115 1638 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms