Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGCLP35914 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 AL158047.1-201ENST00000445918 881 ntBASIC19.45■□□□□ 0.7
HMGCLP35914 UBE2SP1-201ENST00000450587 669 ntBASIC19.45■□□□□ 0.7
HMGCLP35914 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGCLP35914 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.45■□□□□ 0.7
HMGCLP35914 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HMGCLP35914 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HMGCLP35914 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGCLP35914 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCLP35914 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGCLP35914 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HMGCLP35914 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCLP35914 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.44■□□□□ 0.7
HMGCLP35914 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCLP35914 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HMGCLP35914 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCLP35914 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCLP35914 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMGCLP35914 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HMGCLP35914 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCLP35914 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HMGCLP35914 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HMGCLP35914 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.43■□□□□ 0.7
HMGCLP35914 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HMGCLP35914 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HMGCLP35914 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.43■□□□□ 0.7
HMGCLP35914 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCLP35914 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.43■□□□□ 0.7
HMGCLP35914 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.43■□□□□ 0.7
HMGCLP35914 RARRES2P10-201ENST00000564312 460 ntBASIC19.43■□□□□ 0.7
HMGCLP35914 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCLP35914 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HMGCLP35914 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HMGCLP35914 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCLP35914 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCLP35914 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HMGCLP35914 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCLP35914 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCLP35914 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCLP35914 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGCLP35914 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HMGCLP35914 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGCLP35914 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.42■□□□□ 0.7
HMGCLP35914 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCLP35914 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCLP35914 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGCLP35914 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCLP35914 AL353708.3-201ENST00000610272 989 ntBASIC19.42■□□□□ 0.7
HMGCLP35914 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCLP35914 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCLP35914 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGCLP35914 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCLP35914 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCLP35914 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGCLP35914 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCLP35914 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGCLP35914 AL353807.1-201ENST00000427475 662 ntBASIC19.41■□□□□ 0.7
HMGCLP35914 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCLP35914 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCLP35914 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCLP35914 ZNF815P-204ENST00000434898 1737 ntBASIC19.41■□□□□ 0.7
HMGCLP35914 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms