Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSP1P33241 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSP1P33241 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.57■□□□□ 0.72
LSP1P33241 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.57■□□□□ 0.72
LSP1P33241 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.57■□□□□ 0.72
LSP1P33241 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSP1P33241 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.57■□□□□ 0.72
LSP1P33241 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSP1P33241 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.57■□□□□ 0.72
LSP1P33241 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSP1P33241 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LSP1P33241 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.57■□□□□ 0.72
LSP1P33241 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.56■□□□□ 0.72
LSP1P33241 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.56■□□□□ 0.72
LSP1P33241 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LSP1P33241 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.56■□□□□ 0.72
LSP1P33241 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LSP1P33241 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSP1P33241 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.55■□□□□ 0.72
LSP1P33241 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LSP1P33241 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LSP1P33241 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.55■□□□□ 0.72
LSP1P33241 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.55■□□□□ 0.72
LSP1P33241 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.55■□□□□ 0.72
LSP1P33241 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 PRORSD1P-202ENST00000563365 2154 ntBASIC19.55■□□□□ 0.72
LSP1P33241 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.55■□□□□ 0.72
LSP1P33241 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSP1P33241 AC106820.2-201ENST00000563775 3264 ntBASIC19.55■□□□□ 0.72
LSP1P33241 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LSP1P33241 AC099398.1-201ENST00000567919 2776 ntBASIC19.55■□□□□ 0.72
LSP1P33241 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
LSP1P33241 PTBP1P-201ENST00000554374 1601 ntBASIC19.54■□□□□ 0.72
LSP1P33241 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.54■□□□□ 0.72
LSP1P33241 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.54■□□□□ 0.72
LSP1P33241 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LSP1P33241 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LSP1P33241 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
LSP1P33241 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 ABALON-201ENST00000629058 1903 ntBASIC19.54■□□□□ 0.72
LSP1P33241 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
LSP1P33241 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSP1P33241 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.53■□□□□ 0.72
LSP1P33241 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LSP1P33241 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.53■□□□□ 0.72
LSP1P33241 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.53■□□□□ 0.72
LSP1P33241 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LSP1P33241 AC131281.2-201ENST00000520478 145 ntBASIC19.53■□□□□ 0.72
LSP1P33241 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.53■□□□□ 0.72
LSP1P33241 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.53■□□□□ 0.72
LSP1P33241 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.53■□□□□ 0.72
LSP1P33241 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LSP1P33241 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LSP1P33241 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSP1P33241 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.53■□□□□ 0.72
LSP1P33241 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms