Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MMP11P24347 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.53■□□□□ 0.56
MMP11P24347 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MMP11P24347 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP11P24347 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.53■□□□□ 0.56
MMP11P24347 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP11P24347 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.53■□□□□ 0.56
MMP11P24347 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP11P24347 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP11P24347 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP11P24347 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
MMP11P24347 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP11P24347 AC125437.2-201ENST00000625180 2167 ntBASIC18.52■□□□□ 0.56
MMP11P24347 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MMP11P24347 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP11P24347 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP11P24347 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
MMP11P24347 CD177P1-201ENST00000606252 935 ntBASIC18.52■□□□□ 0.56
MMP11P24347 AC073195.1-201ENST00000607241 877 ntBASIC18.52■□□□□ 0.56
MMP11P24347 AL353708.3-201ENST00000610272 989 ntBASIC18.52■□□□□ 0.56
MMP11P24347 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.52■□□□□ 0.56
MMP11P24347 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP11P24347 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
MMP11P24347 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
MMP11P24347 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
MMP11P24347 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
MMP11P24347 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.52■□□□□ 0.55
MMP11P24347 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP11P24347 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MMP11P24347 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MMP11P24347 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP11P24347 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MMP11P24347 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MMP11P24347 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.51■□□□□ 0.55
MMP11P24347 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP11P24347 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP11P24347 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP11P24347 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP11P24347 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.51■□□□□ 0.55
MMP11P24347 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP11P24347 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP11P24347 AC026471.5-201ENST00000615068 467 ntBASIC18.51■□□□□ 0.55
MMP11P24347 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP11P24347 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
MMP11P24347 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.51■□□□□ 0.55
MMP11P24347 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP11P24347 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP11P24347 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP11P24347 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP11P24347 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 AL355355.2-201ENST00000442321 338 ntBASIC18.5■□□□□ 0.55
MMP11P24347 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.5■□□□□ 0.55
MMP11P24347 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 AP002982.1-201ENST00000492365 877 ntBASIC18.5■□□□□ 0.55
MMP11P24347 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP11P24347 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP11P24347 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP11P24347 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP11P24347 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 AC116351.2-201ENST00000606540 1585 ntBASIC18.5■□□□□ 0.55
MMP11P24347 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP11P24347 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.49■□□□□ 0.55
MMP11P24347 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MMP11P24347 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP11P24347 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP11P24347 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MMP11P24347 AC211429.1-201ENST00000415277 523 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms