Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RN7SL471P-201ENST00000580476 299 ntBASIC20.48■□□□□ 0.87
PDGFRAP16234 MTDHP1-201ENST00000605323 784 ntBASIC20.48■□□□□ 0.87
PDGFRAP16234 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFRAP16234 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFRAP16234 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.48■□□□□ 0.87
PDGFRAP16234 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFRAP16234 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.48■□□□□ 0.87
PDGFRAP16234 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
PDGFRAP16234 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.48■□□□□ 0.87
PDGFRAP16234 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.47■□□□□ 0.87
PDGFRAP16234 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
PDGFRAP16234 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PDGFRAP16234 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.47■□□□□ 0.87
PDGFRAP16234 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.47■□□□□ 0.87
PDGFRAP16234 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.47■□□□□ 0.87
PDGFRAP16234 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.47■□□□□ 0.87
PDGFRAP16234 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.47■□□□□ 0.87
PDGFRAP16234 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
PDGFRAP16234 AC066615.1-201ENST00000640911 628 ntBASIC20.47■□□□□ 0.87
PDGFRAP16234 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.47■□□□□ 0.87
PDGFRAP16234 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.47■□□□□ 0.87
PDGFRAP16234 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PDGFRAP16234 AC116562.4-201ENST00000641316 2276 ntBASIC20.47■□□□□ 0.87
PDGFRAP16234 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFRAP16234 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.46■□□□□ 0.87
PDGFRAP16234 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.46■□□□□ 0.87
PDGFRAP16234 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.46■□□□□ 0.87
PDGFRAP16234 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.46■□□□□ 0.87
PDGFRAP16234 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.46■□□□□ 0.87
PDGFRAP16234 AL359736.2-201ENST00000621992 437 ntBASIC20.46■□□□□ 0.87
PDGFRAP16234 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.46■□□□□ 0.87
PDGFRAP16234 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.46■□□□□ 0.87
PDGFRAP16234 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.46■□□□□ 0.87
PDGFRAP16234 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PDGFRAP16234 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFRAP16234 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFRAP16234 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 AC093484.2-201ENST00000580996 2166 ntBASIC20.45■□□□□ 0.86
PDGFRAP16234 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PDGFRAP16234 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PDGFRAP16234 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFRAP16234 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFRAP16234 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDGFRAP16234 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFRAP16234 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.45■□□□□ 0.86
PDGFRAP16234 RPPH1-201ENST00000516869 333 ntBASIC20.45■□□□□ 0.86
PDGFRAP16234 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.45■□□□□ 0.86
PDGFRAP16234 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.45■□□□□ 0.86
PDGFRAP16234 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFRAP16234 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFRAP16234 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PDGFRAP16234 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFRAP16234 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.45■□□□□ 0.86
PDGFRAP16234 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PDGFRAP16234 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.44■□□□□ 0.86
PDGFRAP16234 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.44■□□□□ 0.86
PDGFRAP16234 FAM197Y4-202ENST00000622692 608 ntBASIC20.44■□□□□ 0.86
PDGFRAP16234 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFRAP16234 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.44■□□□□ 0.86
PDGFRAP16234 AC007952.6-201ENST00000573168 2673 ntBASIC20.44■□□□□ 0.86
PDGFRAP16234 AC003957.1-201ENST00000625108 2673 ntBASIC20.44■□□□□ 0.86
PDGFRAP16234 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms