Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.19■□□□□ 0.18
CTSDP07339 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CTSDP07339 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSDP07339 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CTSDP07339 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CTSDP07339 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.18■□□□□ 0.18
CTSDP07339 AL390961.4-201ENST00000623958 2535 ntBASIC16.18■□□□□ 0.18
CTSDP07339 TEX21P-204ENST00000641479 1693 ntBASIC16.18■□□□□ 0.18
CTSDP07339 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CTSDP07339 AC135050.7-201ENST00000624508 2218 ntBASIC16.18■□□□□ 0.18
CTSDP07339 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CTSDP07339 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.18■□□□□ 0.18
CTSDP07339 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.18■□□□□ 0.18
CTSDP07339 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.18■□□□□ 0.18
CTSDP07339 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.18■□□□□ 0.18
CTSDP07339 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 UBE2DNL-204ENST00000602536 740 ntBASIC16.18■□□□□ 0.18
CTSDP07339 MYCNOS-205ENST00000641950 531 ntBASIC16.18■□□□□ 0.18
CTSDP07339 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CTSDP07339 AC104581.1-202ENST00000635932 2618 ntBASIC16.18■□□□□ 0.18
CTSDP07339 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CTSDP07339 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CTSDP07339 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTSDP07339 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CTSDP07339 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.18■□□□□ 0.18
CTSDP07339 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.17■□□□□ 0.18
CTSDP07339 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.17■□□□□ 0.18
CTSDP07339 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.17■□□□□ 0.18
CTSDP07339 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
CTSDP07339 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.17■□□□□ 0.18
CTSDP07339 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
CTSDP07339 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.17■□□□□ 0.18
CTSDP07339 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CTSDP07339 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 KRT19P1-201ENST00000405746 1186 ntBASIC16.17■□□□□ 0.18
CTSDP07339 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 TERF1P5-201ENST00000477545 1207 ntBASIC16.17■□□□□ 0.18
CTSDP07339 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 AC090164.3-201ENST00000610780 2143 ntBASIC16.17■□□□□ 0.18
CTSDP07339 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTSDP07339 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTSDP07339 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.17■□□□□ 0.18
CTSDP07339 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.17■□□□□ 0.18
CTSDP07339 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTSDP07339 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTSDP07339 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTSDP07339 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CTSDP07339 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CTSDP07339 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSDP07339 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.16■□□□□ 0.18
CTSDP07339 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTSDP07339 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTSDP07339 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms