Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
COL5A2P05997 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC25.81■■□□□ 1.72
COL5A2P05997 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.81■■□□□ 1.72
COL5A2P05997 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC25.81■■□□□ 1.72
COL5A2P05997 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL5A2P05997 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL5A2P05997 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL5A2P05997 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.81■■□□□ 1.72
COL5A2P05997 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL5A2P05997 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL5A2P05997 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL5A2P05997 AC246785.2-201ENST00000432512 513 ntBASIC25.8■■□□□ 1.72
COL5A2P05997 GCSHP2-201ENST00000560971 527 ntBASIC25.8■■□□□ 1.72
COL5A2P05997 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL5A2P05997 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC25.8■■□□□ 1.72
COL5A2P05997 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL5A2P05997 SMG8-203ENST00000578922 2178 ntBASIC25.8■■□□□ 1.72
COL5A2P05997 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL5A2P05997 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.8■■□□□ 1.72
COL5A2P05997 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC25.8■■□□□ 1.72
COL5A2P05997 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL5A2P05997 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL5A2P05997 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
COL5A2P05997 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL5A2P05997 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC25.79■■□□□ 1.72
COL5A2P05997 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC25.79■■□□□ 1.72
COL5A2P05997 LINC01311-201ENST00000565162 1445 ntBASIC25.79■■□□□ 1.72
COL5A2P05997 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC25.79■■□□□ 1.72
COL5A2P05997 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
COL5A2P05997 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
COL5A2P05997 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.79■■□□□ 1.72
COL5A2P05997 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL5A2P05997 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC25.79■■□□□ 1.72
COL5A2P05997 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.79■■□□□ 1.72
COL5A2P05997 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC25.79■■□□□ 1.72
COL5A2P05997 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
COL5A2P05997 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.78■■□□□ 1.72
COL5A2P05997 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
COL5A2P05997 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
COL5A2P05997 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
COL5A2P05997 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL5A2P05997 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL5A2P05997 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC25.78■■□□□ 1.72
COL5A2P05997 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL5A2P05997 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL5A2P05997 BCL10-202ENST00000620248 774 ntTSL 5 BASIC25.78■■□□□ 1.72
COL5A2P05997 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.77■■□□□ 1.72
COL5A2P05997 EP400NL-214ENST00000641289 2402 ntBASIC25.77■■□□□ 1.72
COL5A2P05997 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC25.77■■□□□ 1.72
COL5A2P05997 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL5A2P05997 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC25.76■■□□□ 1.71
COL5A2P05997 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL5A2P05997 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL5A2P05997 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.76■■□□□ 1.71
COL5A2P05997 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC25.76■■□□□ 1.71
COL5A2P05997 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL5A2P05997 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.76■■□□□ 1.71
COL5A2P05997 MIR4674-201ENST00000582457 87 ntBASIC25.76■■□□□ 1.71
COL5A2P05997 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL5A2P05997 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC25.76■■□□□ 1.71
COL5A2P05997 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.76■■□□□ 1.71
COL5A2P05997 AP001271.2-201ENST00000624018 1556 ntBASIC25.76■■□□□ 1.71
COL5A2P05997 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL5A2P05997 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL5A2P05997 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL5A2P05997 KRT8P11-201ENST00000409686 1436 ntBASIC25.75■■□□□ 1.71
COL5A2P05997 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL5A2P05997 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL5A2P05997 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC25.75■■□□□ 1.71
COL5A2P05997 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL5A2P05997 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
COL5A2P05997 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC25.75■■□□□ 1.71
COL5A2P05997 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL5A2P05997 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
COL5A2P05997 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL5A2P05997 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.75■■□□□ 1.71
COL5A2P05997 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL5A2P05997 FEM1AP1-201ENST00000431297 1995 ntBASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms